sarek
Variant detector
A workflow designed to detect germline and somatic variants from WGS and targeted sequencing data using bioinformatics tools.
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
412 stars
136 watching
417 forks
Language: Nextflow
last commit: 2 months ago
Linked from 1 awesome list
annotationbioinformaticscancercondacontainersgatk4genomicsgermlinenext-generation-sequencingnextflownf-corepipelinepre-processingreproducible-researchsomatictarget-panelsvariant-callingwhole-exome-sequencingwhole-genome-sequencingworkflow
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