viralrecon
Viral genome assembler
An assembly and variant calling pipeline for viral samples
Assembly and intrahost/low-frequency variant calling for viral samples
128 stars
108 watching
113 forks
Language: Nextflow
last commit: about 1 month ago
Linked from 1 awesome list
ampliconarticassemblycovid-19covid19illuminalong-read-sequencingmetagenomicsnanoporenextflownf-coreontoxford-nanoporepipelinesars-cov-2variant-callingviralvirusworkflow
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