distiller-nf
Hi-C analyzer
A modular pipeline for analyzing Hi-C data from DNA sequences
A modular Hi-C mapping pipeline
87 stars
10 watching
25 forks
Language: Groovy
last commit: 3 months ago
Linked from 1 awesome list
hi-cnextflowpipeline
Related projects:
Repository | Description | Stars |
---|---|---|
| Analyzes ancient DNA sequencing data with tools and workflows optimized for reproducibility and scalability | 152 |
| An analysis pipeline for HLA typing from next-generation sequencing data using integer linear programming and Nextflow | 63 |
| A bioinformatics pipeline for detecting and analyzing gene fusions from RNA sequencing data | 147 |
| Analyzes long non-coding RNA molecules from RNA-seq data | 34 |
| A pipeline for quantifying genomic features from short read data using Nextflow and various software components. | 74 |
| A pipeline for RNA-Seq analyses using nextflow | 2 |
| An initiative to develop and showcase Nextflow-based pipelines for bioinformatics analysis | 10 |
| Provides a collection of pre-configured bioinformatics pipelines and tools for analyzing next-generation sequencing data. | 48 |
| Automated pipeline for processing ChIP-seq data | 17 |
| An automated analysis pipeline for small RNA sequencing data | 74 |
| A repository of pre-built tool modules for efficient pipeline development in Nextflow. | 287 |
| A bioinformatics analysis pipeline for processing ChIP-seq data | 199 |
| An RNA sequencing analysis pipeline that performs quality control, trimming, alignment, and quantification of gene expression from raw sequencing data. | 941 |
| Automates preprocessing of whole exome sequencing data using GATK best practices | 10 |
| Analyzes DNA sequencing data from circular vectors to generate annotated maps and GenBank files. | 5 |