nf-hack17-tutorial
Nextflow Tutorial
A tutorial project providing hands-on experience with Nextflow and bioinformatics pipelines
Nextflow basic tutorial for newbie users
32 stars
7 watching
18 forks
Language: Nextflow
last commit: over 7 years ago
Linked from 1 awesome list
bioinformaticsdockergenomicsnextflowsingularitytutorial
Related projects:
| Repository | Description | Stars |
|---|---|---|
| nextflow-io/nf-hack17 | An initiative to develop and showcase Nextflow-based pipelines for bioinformatics analysis | 10 |
| nextflow-io/crg-course-nov16 | A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline | 23 |
| nextflow-io/rnaseq-nf | A pipeline for quantifying genomic features from short read data using Nextflow and various software components. | 74 |
 biocorecrg/bionextflow | A collection of reusable modules and sub-workflows for Nextflow pipelines in bioinformatics | 26 |
| nextflow-io/elixir-workshop-21 | A tutorial project demonstrating Nextflow workflow management for Elixir workflows | 5 |
| nextflow-io/nf-sqldb | Provides support for interacting with SQL databases in workflow scripts | 26 |
 ncbi-hackathons/spew | Automates the packaging and distribution of bioinformatics pipelines for seamless deployment on various workstations. | 26 |
 nf-core/tools | Provides a set of reusable Python functions and tools for bioinformatics and workflow management. | 245 |
| nextflow-io/patterns | A curated collection of reusable patterns and techniques for implementing Nextflow workflows | 336 |
 shaze/nextflow-course | Teaches Nextflow DSL2 using a tutorial-style course with exercises | 6 |
| nf-core/rnafusion | A bioinformatics pipeline for detecting and analyzing gene fusions from RNA sequencing data | 147 |
 zuberlab/crispr-process-nf | Tools for processing CRISPR and shRNA data in a high-throughput screening workflow | 3 |
| ncbi-hackathons/atacflow | A Nextflow-based pipeline for performing ATAC-seq analysis | 14 |
 guigolab/grape-nf | Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers | 37 |
 bionode/biohacker | A workshop project providing examples and usage guidance for using bionode in bioinformatics pipelines | 5 |