crg-course-nov16
by nextflow-io
Nextflow + Docker tutorial material
AI summary
RNA sequencing pipeline
A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline
- stars
- 23
- forks
- 6
- watching
- 3
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Pipeline
A pipeline for quantifying genomic features from short read data using Nextflow and various software components.
RNA seq pipeline
A Nextflow-based workflow for processing and analyzing Oxford Nanopore direct RNA sequencing data
RNA pipeline
A Nextflow-based pipeline for processing RNA-Seq data using Docker containers
Variant caller
A Nextflow pipeline for RNA sequencing variant calling with GATK best practices
RNA-seq pipeline
Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers
RNA pipeline
A pipeline for RNA-Seq analyses using nextflow
Pipeline framework
A collection of reusable modules and sub-workflows for Nextflow pipelines in bioinformatics
Pipeline
A Nextflow pipeline script for processing ancient DNA sequencing data.
Nextflow Tutorial
A tutorial project providing hands-on experience with Nextflow and bioinformatics pipelines
RNA seq pipeline
A tool suite implementing Kallisto and Sleuth RNA-seq analysis pipelines in Nextflow
Bioinformatics pipeline project
An initiative to develop and showcase Nextflow-based pipelines for bioinformatics analysis
Sequencing pipeline
A data pipeline framework for processing Ion Torrent sequencing data
RNA seq processor
A Nextflow pipeline for processing RNA-seq data
Transcriptome analyzer
A Nextflow pipeline for analyzing transcriptome data using STAR and featurecounts
Nanopore RNA sequencer
An open-source Nextflow pipeline for analyzing Nanopore sequencing data from various types of RNA sequences.
Featured in 1 awesome list
Each link jumps to the spot where the list mentions crg-course-nov16.