iasi-pipe
Sequencing pipeline
A data pipeline framework for processing Ion Torrent sequencing data
nextflow data pipeline for Ion Torrent data
2 stars
1 watching
0 forks
last commit: over 11 years agoLinked from 1 awesome list
Related projects:
| Repository | Description | Stars |
|---|---|---|
| A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline | 23 | |
| A configuration for running kallisto sequencing analysis using the Nextflow workflow management system. | 3 | |
| A pipeline for quantifying genomic features from short read data using Nextflow and various software components. | 74 | |
| A Python library providing a simple and flexible way to process sequences of data using infix notation. | 1,965 | |
| Provides a collection of pre-configured bioinformatics pipelines and tools for analyzing next-generation sequencing data. | 48 | |
| An integration of NextFlow and Kallisto for automated analysis of high-throughput sequencing data | 3 | |
| A collection of reusable computational pipelines for bioinformatics tasks. | 2 | |
| A Nextflow pipeline for analyzing transcriptome data using STAR and featurecounts | 4 | |
| A Nextflow pipeline script for processing ancient DNA sequencing data. | 2 | |
| A toolbox for industrial data analytics and stream processing | 614 | |
| Provides functions and methods to chain operations in R, enhancing readability and maintainability of data pipelines. | 169 | |
| A language and runtime for crafting massively parallel data pipelines | 375 | |
| A framework for defining and automating bioinformatics pipelines using Nextflow. | 44 | |
| Enables parallel processing of data by dividing tasks into independent queues managed by Riak Core's vnode architecture. | 162 | |
| A framework for designing and executing concurrent data pipelines with a focus on simplicity and efficiency | 25 |