iasi-pipe
Sequencing pipeline
A data pipeline framework for processing Ion Torrent sequencing data
nextflow data pipeline for Ion Torrent data
2 stars
1 watching
0 forks
last commit: over 9 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
nextflow-io/crg-course-nov16 | A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline | 23 |
insilicodb/pipeline-kallisto | A configuration for running kallisto sequencing analysis using the Nextflow workflow management system. | 3 |
nextflow-io/rnaseq-nf | A pipeline for quantifying genomic features from short read data using Nextflow and various software components. | 72 |
julienpalard/pipe | A Python library providing a simple and flexible way to process sequences of data using infix notation. | 1,954 |
iarcbioinfo/iarc-nf | Provides a collection of pre-configured bioinformatics pipelines and tools for analyzing next-generation sequencing data. | 47 |
averasd/nextflow-kallisto | An integration of NextFlow and Kallisto for automated analysis of high-throughput sequencing data | 3 |
hadrieng/pipelines | A collection of reusable computational pipelines for bioinformatics tasks. | 2 |
averasd/nextflow-rnastar | A Nextflow pipeline for analyzing transcriptome data using STAR and featurecounts | 4 |
crickbabs/babs-adnaseq | A Nextflow pipeline script for processing ancient DNA sequencing data. | 2 |
apache/streampipes | A toolbox for industrial data analytics and stream processing | 605 |
renkun-ken/piper | Provides functions and methods to chain operations in R, enhancing readability and maintainability of data pipelines. | 169 |
calebwin/pipelines | A language and runtime for crafting massively parallel data pipelines | 374 |
montilab/pipeliner | A framework for defining and automating bioinformatics pipelines using Nextflow. | 44 |
basho/riak_pipe | Enables parallel processing of data by dividing tasks into independent queues managed by Riak Core's vnode architecture. | 162 |
giacbrd/smartpipeline | A framework for designing and executing concurrent data pipelines with a focus on simplicity and efficiency | 23 |