embeddr
Data analyzer
Analyzes single-cell RNA-seq data using pseudotemporal ordering and clustering
This repository is retired software
12 stars
3 watching
3 forks
Language: R
last commit: over 9 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
| A web-based Shiny application for analyzing single-cell RNA sequencing data | 23 |
| Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis. | 22 |
| A tool for clustering cells from single cell RNA-Seq experiments | 121 |
| An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
| An interactive R/Shiny app for analyzing cell-cell communication from single-cell transcriptomics data | 9 |
| Analyzes single-cell RNA-seq data to detect allele-specific copy number variations and infer lineage relationships in cancer cells | 171 |
| A software package that uses Bayesian inference to assign gene expression estimates from single-cell RNA-seq and DNA-seq data to specific cancer clones. | 32 |
| Analyzing single-cell RNA-seq data using R and Bioconductor tools | 76 |
| Analyzes single-cell RNA-seq data using statistical models and machine learning algorithms | 15 |
| A Python-based software framework for analyzing mass/flow cytometry data to identify phenotype-associated cell subsets. | 65 |
| A package providing tools for comparing and analyzing clusterings of single-cell sequencing data | 37 |
| Provides tools and methods for analyzing single-cell RNA sequencing data using statistical models | 228 |
| An open-source R package providing tools and methods for analyzing single cell RNA-seq data | 217 |
| Analyzing and comparing single-cell RNA-seq data across multiple conditions to infer cell trajectories and detect differential expression. | 25 |
| A software pipeline for analyzing single-cell RNA-seq data from droplet-based experiments | 88 |