clusterExperiment
Cluster analysis tool
A package providing tools for comparing and analyzing clusterings of single-cell sequencing data
R package of techniques for comparing clusterings of single-cell sequencing data
37 stars
4 watching
13 forks
Language: R
last commit: 7 months ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
epurdom/cobolt | Analyzes and integrates multimodal single-cell sequencing data from different modalities | 18 |
kieranrcampbell/embeddr | Analyzes single-cell RNA-seq data using pseudotemporal ordering and clustering | 12 |
galadrielbriere/clustomics | An open-source software tool for applying consensus clustering to multi-omic data for disease subtyping | 5 |
hemberg-lab/sc3 | A tool for clustering cells from single cell RNA-Seq experiments | 119 |
debsin/dropclust | A bioinformatics R package for cluster analysis of single-cell RNA-seq data | 23 |
pimentel/scca-bc | Analyzes data to identify linear relationships and groups them into clusters | 2 |
efremidze/cluster | A map annotation clustering library that efficiently groups and displays geographic pins on an iOS map view. | 1,275 |
aertslab/cistopic | An R package for identifying cell states and cis-regulatory topics from single-cell epigenomics data | 135 |
asmagen/robustsinglecell | An R-based software package for analyzing scRNA-seq data to identify robust cell subpopulations and compare population compositions across different tissues and experimental models. | 13 |
ericpante/marmap | A tool for analyzing and visualizing bathymetric and topographic data using R. | 32 |
umr-cnrm/epygram | A Python package for analyzing and visualizing meteorological fields. | 15 |
hexgnu/wine_clustering | An application of machine learning to cluster similar data points from various sources | 0 |
hms-dbmi/scde | Provides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis. | 173 |
rglab/mast | Provides tools and methods for analyzing single-cell RNA sequencing data using statistical models | 228 |
nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |