excelerate-scRNAseq

Single cell RNA-seq analysis tool

An open-source R package providing tools and methods for analyzing single cell RNA-seq data

Single RNA-seq data analysis with R (Finland, May, 2019)

GitHub

217 stars
61 watching
108 forks
Language: HTML
last commit: about 4 years ago
Linked from 1 awesome list


Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
nbisweden/workshop-scrnaseqAn educational resource offering interactive R, Python, and Seurat labs for analyzing single-cell RNA sequencing data.199
hemberg-lab/scrna.seq.courseAn open-source teaching package for the computational analysis of single-cell RNA-seq data using R.673
cellgeni/scrna.seq.courseAn educational resource teaching computational analysis of single-cell RNA-seq data using R and Bioconductor tools125
lingfeiwang/normalisrA software framework for analyzing single-cell RNA sequencing data18
scrna-seq/tascA toolkit for analyzing single-cell RNA sequencing data using computational methods and algorithms2
imb-computational-genomics-lab/ascendTools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis.22
nasqar/seuratv3wizardAn R-based web application for guided single-cell RNA-seq data analysis and clustering33
hms-dbmi/scdeProvides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis.173
bioinformatics-core-shared-training/univcambridge_scrnaseq_nov2021An educational resource providing an introduction to single-cell RNA-seq analysis with interactive tutorials and resources.3
snakemake-workflows/single-cell-rna-seqA workflow generator for single-cell RNA-seq data analysis100
kirstlab/asc_seuratAn R-based web application for scRNA-seq analysis that provides a user-friendly interface for data preprocessing, visualization, and annotation.23
catavallejos/basicsAn integrated Bayesian hierarchical model to analyze single-cell sequencing data84
hbctraining/scrna-seq_onlineTeaching materials for a workshop on single-cell RNA-seq data analysis in R533
xmc811/scillusA package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets.60
nasqar/seuratwizardA web-based interactive application for guided single-cell RNA-seq data analysis and clustering using Seurat.13