DALI
Data Analysis Interface
Tool for integrated analysis of single-cell RNAseq data and immune receptor profiling data
R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem
20 stars
4 watching
0 forks
Language: R
last commit: over 1 year ago
Linked from 1 awesome list
seandavi/awesome-single-cellRelated projects:
| Repository | Description | Stars |
|---|---|---|
 drisso/bioc2016singlecell | Analyzing single-cell RNA-seq data using R and Bioconductor tools | 77 |
 scverse/scirpy | Analyzes single-cell TCR and BCR data from scRNA-seq using Python | 220 |
 xmc811/scillus | A package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets. | 53 |
 dtm2451/dittoseq | A suite of functions for analyzing and visualizing RNA sequencing data | 190 |
 imb-computational-genomics-lab/ascend | Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis. | 22 |
 nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
 immcore/is-cellr | A web-based Shiny application for analyzing single-cell RNA sequencing data | 23 |
 hms-dbmi/scde | Provides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis. | 173 |
 rglab/mast | Provides tools and methods for analyzing single-cell RNA sequencing data using statistical models | 228 |
| scverse/scvi-tools | Probabilistic analysis tools for single-cell omics data | 1,251 |
 iosonofabio/singlet | Analyzes single cell RNA sequence data with quantitative phenotypes | 13 |
 ncborcherding/screpertoire | A toolkit for analyzing single-cell immune data from various formats using machine learning and bioinformatics techniques. | 310 |
 nghiavtr/bpsc | A package for analyzing single-cell RNA-seq data using a beta-Poisson model. | 16 |
 kstreet13/bioc2020trajectories | An R package for comparing multiple conditions in single-cell RNA-seq trajectory inference | 25 |
 ucarlab/iasva | An R package that identifies hidden factors in data to uncover sources of variation | 8 |