singlet
Data analyzer
Analyzes single cell RNA sequence data with quantitative phenotypes
Single cell RNA Seq data analysis with quantitative phenotypes
13 stars
6 watching
7 forks
Language: Python
last commit: about 4 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
rabadanlab/sctda | An object-oriented Python library for analyzing single-cell RNA-seq data using topological representations | 7 |
jhu99/scbean | Analyzes single-cell multi-omics data from various modalities like RNA-seq and ATAC-seq | 16 |
timoast/sinto | Tools for analyzing aligned single-cell data from sequencing experiments | 118 |
nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
drisso/bioc2016singlecell | Analyzing single-cell RNA-seq data using R and Bioconductor tools | 77 |
nasqar/seuratwizard | A web-based interactive application for guided single-cell RNA-seq data analysis and clustering using Seurat. | 13 |
yjzhang/uncurl_python | Analyzes single-cell RNA-seq data using statistical models and machine learning algorithms | 15 |
scrna-seq/tasc | A toolkit for analyzing single-cell RNA sequencing data using computational methods and algorithms | 2 |
snakemake-workflows/single-cell-rna-seq | A workflow generator for single-cell RNA-seq data analysis | 97 |
imb-computational-genomics-lab/ascend | Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis. | 22 |
scverse/scvi-tools | Probabilistic analysis tools for single-cell omics data | 1,251 |
sib-swiss/single-cell-training | An online course on single-cell transcriptomics using the Seurat pipeline and R | 78 |
kstreet13/bioc2020trajectories | An R package for comparing multiple conditions in single-cell RNA-seq trajectory inference | 25 |
jhsmit/colicoords | An open-source Python project for analyzing fluorescence microscopy data from rodlike cells. | 26 |
euxhenh/cellar | An interactive software tool for analyzing single-cell omics data | 31 |