rnaseq_tutorial

bioinformatics-core-shared-training/univcambridge_scrnaseq_nov20213

RNA-seq tutorial

An educational resource providing an introduction to single-cell RNA-seq analysis with interactive tutorials and resources.

dowell-lab/rnaseq-flow8

RNA seq processor

A Nextflow pipeline for processing RNA-seq data

hemberg-lab/scrna.seq.course673

RNA-seq course

An open-source teaching package for the computational analysis of single-cell RNA-seq data using R.

guigolab/grape-nf37

RNA-seq pipeline

Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers

nf-core/rnaseq941

RNA seq analyzer

An RNA sequencing analysis pipeline that performs quality control, trimming, alignment, and quantification of gene expression from raw sequencing data.

snakemake-workflows/single-cell-rna-seq100

RNA-seq analyzer

A workflow generator for single-cell RNA-seq data analysis

hoohm/dropseqpipe147

RNASeq pipeline

A pre-processing workflow for SingleCell RNASeq data from raw sequencing data to final count matrix with QC plots.

fredericlemoine/rna-pipeline4

RNA pipeline

A Nextflow-based pipeline for processing RNA-Seq data using Docker containers

kharchenkolab/dropest88

Single-cell RNA-seq analysis pipeline

A software pipeline for analyzing single-cell RNA-seq data from droplet-based experiments

pachterlab/kallistobustools115

RNA seq pipeline

A workflow for pre-processing single-cell RNA-seq data using Kallisto and Bustools.

crazyhottommy/rna-seq-analysis951

RNA analysis toolbox

A collection of resources and tools for analyzing RNA sequencing data using Python and Snakemake workflows

hbctraining/scrna-seq_online533

Workshop

Teaching materials for a workshop on single-cell RNA-seq data analysis in R

theislab/single-cell-tutorial1.4K

Single-cell RNA-seq guide

Provides a comprehensive tutorial and workflow for single-cell RNA-seq analysis

cbcrg/kallisto-nf22

RNA seq pipeline

A tool suite implementing Kallisto and Sleuth RNA-seq analysis pipelines in Nextflow

cbcrg/grape-nf2

RNA pipeline

A pipeline for RNA-Seq analyses using nextflow