alevin-fry
by COMBINE-lab
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
AI summary
Sequence analyzer
A toolset for processing single-cell sequencing data from RNA-seq and other sources with an emphasis on efficiency, accuracy, and memory frugality.
- stars
- 174
- forks
- 15
- watching
- 9
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Single-cell analyzer
An R-based web application for guided single-cell RNA-seq data analysis and clustering
Single-cell analyzer
A web-based interactive application for guided single-cell RNA-seq data analysis and clustering using Seurat.
RNA seq analyzer
An RNA sequencing analysis pipeline that performs quality control, trimming, alignment, and quantification of gene expression from raw sequencing data.
Sequence analyzer
Algorithmic software for analyzing single-cell RNA sequencing data to reconstruct T cell receptor sequences.
Data analyzer
Analyzes single cell RNA sequence data with quantitative phenotypes
RNA-seq analyzer
A workflow generator for single-cell RNA-seq data analysis
RNA analysis toolkit
A suite of functions for analyzing and visualizing RNA sequencing data
mRNA aligner
Analyze single cell mRNA expression at specific genomic loci using read alignment and filtering techniques
RNA sequencing analysis workshop
An educational workshop on single-cell RNA-seq analysis using the Seurat R package
Cell analysis tool
Analyzes single-cell RNA-seq data to detect allele-specific copy number variations and infer lineage relationships in cancer cells
Cell annotator
Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes
Single-cell analysis library
A package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets.
Multi-omics analyzer
Analyzes single-cell multi-omics data from various modalities like RNA-seq and ATAC-seq
Cell analysis software
Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis.
Factor analyzer
Analyzes correlated hidden factors from single-cell transcriptomes to identify biological variation
Featured in 1 awesome list
Each link jumps to the spot where the list mentions alevin-fry.
