virID
Microorganism assembler
A pipeline for assembling and classifying microorganisms from next-generation sequencing data
Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.
11 stars
3 watching
3 forks
Language: Python
last commit: over 4 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
j4mie/micromodels | A library that provides declarative dictionary-based model classes for building and serializing data structures in Python. | 104 |
nf-core/viralrecon | An assembly and variant calling pipeline for viral samples | 124 |
jtaghiyar/kronos | Tools and workflow management for large-scale genome data analysis | 19 |
ncbi-hackathons/spew | Automates the packaging and distribution of bioinformatics pipelines for seamless deployment on various workstations. | 26 |
montilab/pipeliner | A framework for defining and automating bioinformatics pipelines using Nextflow. | 44 |
biocorecrg/mop2 | A Nextflow-based workflow for processing and analyzing nanopore RNA sequencing data | 23 |
jgreenemi/parris | Automates the setup and training of machine learning algorithms on remote servers | 316 |
vimalabs/vima | An implementation of a general-purpose robot learning model using multimodal prompts | 774 |
v420v/vas | An x86-64 assembler written in V language | 98 |
jvalegre/robert | Automated machine learning protocols for cheminformatics using Python | 38 |
ailab-cvc/seed | An implementation of a multimodal language model with capabilities for comprehension and generation | 582 |
nanotee/zoxide.vim | A Vim plugin that wraps the functionality of zoxide for convenient directory navigation. | 222 |
bjpop/rubra | A bioinformatics pipeline system that supports running workflow stages on a distributed compute cluster. | 38 |
nf-core/mag | An assembly and binning pipeline for analyzing metagenomes | 216 |
cdcgov/mycosnp-nf | An analysis pipeline for whole genome sequencing of fungal organisms. | 37 |