hail
Genomic data analysis platform
A Python-based tool for analyzing genomic data in the cloud with support for batch computing and distributed queries
Cloud-native genomic dataframes and batch computing
984 stars
55 watching
246 forks
Language: Python
last commit: 6 days ago
Linked from 1 awesome list
bioinformaticsgeneticsgenomicsgwashailpythonsoftwarevcf
awesome-spark/awesome-sparkRelated projects:
| Repository | Description | Stars |
|---|---|---|
 bigdatagenomics/adam | A platform for parallelizing genomic data analysis on large clusters | 1,003 |
 brwnj/smoove-nf | An automation workflow for detecting structural variations in genomic data using the smoove toolset | 12 |
 pachterlab/gget | Enables efficient querying of genomic databases using a modular approach and multiple tools | 946 |
 umich-biostatistics/ibag | An R application for conducting Bayesian analyses of genomic models using a user-friendly interface. | 5 |
 andersenlab/cegwas2-nf | A software framework for genomic association studies using C. elegans data | 8 |
 nationalgenomicsinfrastructure/icing | An approach to analyzing OxfordNanopore reads for HLA typing using Python | 13 |
 h3abionet/h3agwas | A comprehensive human genome-wide association study workflow for data quality control and basic association testing. | 106 |
| h3abionet/chipimputation | An imputation workflow tool for genomics data analysis | 20 |
 hexgnu/wine_clustering | An application of machine learning to cluster similar data points from various sources | 0 |
 jtaghiyar/kronos | Tools and workflow management for large-scale genome data analysis | 19 |
 nvidia-genomics-research/rapids-single-cell-examples | A collection of example notebooks demonstrating GPU-accelerated single-cell genomic analysis using the RAPIDS libraries | 324 |
 emissions-api/emissions-api | Provides access to satellite-based emission data | 75 |
 singularity-energy/open-grid-emissions | Provides tools and data for high-quality hourly grid emissions analysis | 75 |
 sigven/pcgr | Software tool for annotating and interpreting cancer genome data to support precision oncology | 254 |
 glacials/splits-io | A speedrunning data store and analysis engine that enables runners to improve through data analysis. | 133 |