pcgr
by sigven
Personal Cancer Genome Reporter (PCGR)
AI summary
Genome annotator
Software tool for annotating and interpreting cancer genome data to support precision oncology
- stars
- 256
- forks
- 48
- watching
- 24
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Workflow assembler
A workflow assembler for genome analytics and informatics.
Genome analyzer
A software framework for implementing high-quality assembly, quality control, and annotation of bacterial genomes
Metagenomics analyzer
A tool for analyzing metagenomic data by aligning short or long reads against a reference sequence and generating reports on bacterial growth and abundance
Genomic query tool
Enables efficient querying of genomic databases using a modular approach and multiple tools
Cancer mutation analyzer
An annotation and machine learning framework for analyzing cancer mutations
Cancer gene finder
An algorithm for identifying cancer driver genes by integrating multi-omics data and penalized regression
Genome pipeline
A Nextflow pipeline for running structural variation callers on whole genome sequencing data
Variant caller
A Nextflow pipeline for RNA sequencing variant calling with GATK best practices
Gene expression analyzer
A package for analyzing single-cell RNA-seq data using a beta-Poisson model.
Cancer gene prioritizer
Tools for integrating multi-omics data to prioritize cancer genes
Genomic SV caller
An automation workflow for detecting structural variations in genomic data using the smoove toolset
Cell RNA-Seq Analysis
Analyzing multiplexed single-cell RNA-seq data from a marine organism, providing tools for preprocessing, clustering, and analysis of gene expression across different cell types.
Splicing analyzer
An integrative pipeline for analyzing splicing events from RNA sequencing data
Image-Gene Mapping
Develops a method to learn shared latent structure between biomedical images and gene expression data
Organism Atlas
An R package for visualizing anatograms of different organisms based on tissue coordinates from publicly available data sources.
Featured in 1 awesome list
Each link jumps to the spot where the list mentions pcgr.
