gget
Genomic query tool
Enables efficient querying of genomic databases using a modular approach and multiple tools
🧬 gget enables efficient querying of genomic reference databases
946 stars
10 watching
74 forks
Language: Python
last commit: 7 days ago
Linked from 1 awesome list
alphafoldalphafold2archs4blastdatabasesenrichment-analysisenrichrensemblggetncbireferenceuniprot
Related projects:
Repository | Description | Stars |
---|---|---|
pachterlab/mbgblhgp_2019 | Code repository for reproducing RNA-seq data analysis results from a specific scientific paper | 23 |
zqfang/gseapy | A software package for performing gene set enrichment analysis in various types of biological data. | 566 |
alexeyco/pig | A pgx wrapper that simplifies executing and scanning query results in PostgreSQL databases | 16 |
gramps-project/gramps | A genealogy program with features for hobbyists and professional genealogists | 2,193 |
andersenlab/cegwas2-nf | A software framework for genomic association studies using C. elegans data | 8 |
pachterlab/cwgflhgcchap_2021 | Analyzing multiplexed single-cell RNA-seq data from a marine organism, providing tools for preprocessing, clustering, and analysis of gene expression across different cell types. | 2 |
gvinciguerra/pgm-index | A data structure library providing fast search capabilities for large datasets | 789 |
sigven/pcgr | Software tool for annotating and interpreting cancer genome data to support precision oncology | 254 |
gnames/gnparser | Normalizes scientific names and extracts their semantic elements. | 40 |
mattcowgill/ggannotate | A tool for adding annotations to ggplot2 plots interactively | 309 |
nickgerace/gfold | A tool to help manage multiple Git repositories | 309 |
nschloe/pygmsh | A Python wrapper around Gmsh for creating and manipulating complex geometries | 858 |
gh-rdf3x/gh-rdf3x | An extension of the RDF-3X engine and translatesparql tool with additional features for more complex queries. | 46 |
datawan-labs/pg | A client-side PostgreSQL app with a query playground and ERD schema generator for learning and development purposes | 349 |
haskell-gi/haskell-gi | Generates Haskell bindings for GObject Introspection capable libraries | 290 |