icing
HLA analysis tool
An approach to analyzing OxfordNanopore reads for HLA typing using Python
An attempt to make HLA typing from OxfordNanopore reads (MinION platform)
13 stars
10 watching
1 forks
Language: Python
last commit: over 6 years ago
Linked from 1 awesome list
nextflow-io/awesome-nextflowRelated projects:
| Repository | Description | Stars |
|---|---|---|
 nf-core/hlatyping | An analysis pipeline for HLA typing from next-generation sequencing data using integer linear programming and Nextflow | 63 |
 eiriniar/cellcnn | A Python-based software framework for analyzing mass/flow cytometry data to identify phenotype-associated cell subsets. | 65 |
 xnuohz/graph-kernel | A Python framework for graph similarity analysis using kernel methods. | 0 |
 rraadd88/htsimaging | A Python package for analyzing high-throughput single-cell imaging data | 5 |
 huspacy/huspacy | An industrial-strength natural language processing library for Hungarian language text analysis | 155 |
 hydrologie/xhydro | A Python library for analyzing and processing hydrological data from various sources. | 24 |
 mne-tools/mne-python-notebooks | Interactive notebooks for EEG/MEG data analysis using Python | 26 |
 leosmigel/analyzingalpha | Analyzes and processes Alpha data to extract insights | 477 |
 grid-parity-exchange/egret | A Python-based package for solving optimization problems in power systems | 133 |
 curiositry/eegrunt | Tools and utilities for analyzing and visualizing EEG data from various sources. | 241 |
 lowresourcelanguages/hltdi-morphology | Provides morphological analysis tools for various languages, including verb and noun generation, based on archived web pages. | 5 |
 pachterlab/gget | Enables efficient querying of genomic databases using a modular approach and multiple tools | 946 |
 guigolab/ipsa-nf | An integrative pipeline for analyzing splicing events from RNA sequencing data | 9 |
 janpipek/physt | A Python library for creating and manipulating histogram objects with visualization tools. | 134 |
 odiogosilva/innuca-nf | A software framework for implementing high-quality assembly, quality control, and annotation of bacterial genomes | 3 |