DoubletDecon
Data decontamination tool
Deconvolutes single-cell RNA-seq data from potential doublets to remove contamination
A tool for removing doublets from single-cell RNA-seq data
69 stars
6 watching
19 forks
Language: R
last commit: almost 6 years agoLinked from 1 awesome list
Related projects:
| Repository | Description | Stars |
|---|---|---|
| A suite of functions for analyzing and visualizing RNA sequencing data | 191 | |
| A tool to quantify and remove cell-specific mRNA contamination from single-cell RNA-seq data. | 260 | |
| A tool for detecting technical errors in single-cell RNA-seq data | 87 | |
| Analyzing single-cell RNA-seq data using R and Bioconductor tools | 76 | |
| A software tool that identifies sample identity and detects multiplets in pooled single cell RNA-seq samples. | 122 | |
| Deconvolution method to remove noise from antibody-derived tag data | 64 | |
| A tool to identify technical doublets in single-cell RNA-seq data by removing co-encapsulated cells from the analysis | 138 | |
| Detects doublets in single-cell RNA sequencing data by analyzing cell distances and proportions of artificial neighbors | 424 | |
| A Dissect module implementing a parser for a specific Microsoft database format used in various enterprise systems. | 18 | |
| Software for accurate imputation of scRNA-seq data with robust methods and fast calculation. | 92 | |
| A digital forensics framework that provides tools and parsers to analyze forensic artefacts from various disk and file formats. | 939 | |
| Probabilistic analysis tools for single-cell omics data | 1,270 | |
| Analyzes single cell RNA sequence data with quantitative phenotypes | 13 | |
| Tool for integrated analysis of single-cell RNAseq data and immune receptor profiling data | 20 | |
| Analyzes single-cell RNA-seq data using statistical models and machine learning algorithms | 15 |