piper-nf
by cbcrg
RNA mapping pipeline
AI summary
RNA mapper
A pipeline tool for detecting and mapping long non-coding RNAs from RNA sequences.
- stars
- 18
- forks
- 5
- watching
- 17
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
RNA pipeline
A pipeline for RNA-Seq analyses using nextflow
RNA seq pipeline
A tool suite implementing Kallisto and Sleuth RNA-seq analysis pipelines in Nextflow
RNA analyzer
Analyzes long non-coding RNA molecules from RNA-seq data
RNA annotation pipeline
A pipeline for annotating long non-coding RNAs from RNA sequencing data using the STAR, Cufflinks, and FEELnc tools.
Antimicrobial predictor
An automated pipeline for predicting protein antimicrobial regions
Guide tree aligner
Automates multiple sequence alignment by evaluating and selecting the best guide tree variations
Variant caller
A Nextflow pipeline for RNA sequencing variant calling with GATK best practices
RNA sequencing pipeline
A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline
Pipeline
A pipeline for quantifying genomic features from short read data using Nextflow and various software components.
Gene fusion analyzer
A bioinformatics pipeline for detecting and analyzing gene fusions from RNA sequencing data
RNA pipeline
A Nextflow-based pipeline for processing RNA-Seq data using Docker containers
RNA seq processor
An automated analysis pipeline for small RNA sequencing data
Alignment Benchmark
Generates a benchmark dataset for evaluating protein alignment programs
RNA-seq pipeline
Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers
RNA seq analyzer
An RNA sequencing analysis pipeline that performs quality control, trimming, alignment, and quantification of gene expression from raw sequencing data.
Featured in 1 awesome list
Each link jumps to the spot where the list mentions piper-nf.