piper-nf
RNA mapper
A pipeline tool for detecting and mapping long non-coding RNAs from RNA sequences.
RNA mapping pipeline
18 stars
17 watching
5 forks
Language: Nextflow
last commit: over 6 years ago
Linked from 1 awesome list
nextflowpipeline
Related projects:
Repository | Description | Stars |
---|---|---|
| A pipeline for RNA-Seq analyses using nextflow | 2 |
| A tool suite implementing Kallisto and Sleuth RNA-seq analysis pipelines in Nextflow | 22 |
| Analyzes long non-coding RNA molecules from RNA-seq data | 34 |
| A pipeline for annotating long non-coding RNAs from RNA sequencing data using the STAR, Cufflinks, and FEELnc tools. | 11 |
| An automated pipeline for predicting protein antimicrobial regions | 5 |
| Automates multiple sequence alignment by evaluating and selecting the best guide tree variations | 2 |
| A Nextflow pipeline for RNA sequencing variant calling with GATK best practices | 132 |
| A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline | 23 |
| A pipeline for quantifying genomic features from short read data using Nextflow and various software components. | 74 |
| A bioinformatics pipeline for detecting and analyzing gene fusions from RNA sequencing data | 147 |
| A Nextflow-based pipeline for processing RNA-Seq data using Docker containers | 4 |
| An automated analysis pipeline for small RNA sequencing data | 74 |
| Generates a benchmark dataset for evaluating protein alignment programs | 3 |
| Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers | 37 |
| An RNA sequencing analysis pipeline that performs quality control, trimming, alignment, and quantification of gene expression from raw sequencing data. | 941 |