benchfam
Alignment Benchmark
Generates a benchmark dataset for evaluating protein alignment programs
3 stars
15 watching
1 forks
Language: Shell
last commit: about 7 years ago
Linked from 1 awesome list
nextflowpipeline
Related projects:
Repository | Description | Stars |
---|---|---|
| Automates multiple sequence alignment by evaluating and selecting the best guide tree variations | 2 |
| An automated pipeline for predicting protein antimicrobial regions | 5 |
| A pipeline for RNA-Seq analyses using nextflow | 2 |
| Provides benchmarking functions for mathematical optimization algorithms | 67 |
| A pipeline tool for detecting and mapping long non-coding RNAs from RNA sequences. | 18 |
| An open-source benchmarking framework for evaluating cross-style visual capability of large multimodal models | 84 |
| A tool suite implementing Kallisto and Sleuth RNA-seq analysis pipelines in Nextflow | 22 |
| Evaluates and aligns the values of Chinese large language models with safety and responsibility standards | 481 |
| A collection of reusable modules and sub-workflows for Nextflow pipelines in bioinformatics | 26 |
| A Nextflow pipeline script for processing ancient DNA sequencing data. | 2 |
| Provides pre-trained protein embeddings and benchmarking tools for semi-supervised learning tasks in protein biology | 671 |
| Automated pipeline for featureCounts on RNAseq BAM files from ICGC datasets | 3 |
| A tutorial project on using Nextflow and Docker for implementing a RNA-Seq pipeline | 23 |
| Tools for computing average metrics from reads overlapping given positions | 1 |
| A lightweight benchmarking framework with a simple statistical model | 80 |