scFoundation
AI summary
Cell analysis tool
Develops a large-scale model to analyze single-cell transcriptomics data and provides tools for downstream tasks such as gene expression enhancement and drug response prediction.
- stars
- 276
- forks
- 43
- watching
- 6
Similar projects
Found by comparing what the projects do, not just their names.
Data processor
Tools for quality control and normalization of single-cell RNA-seq data
Trajectory analysis
Analyzing and comparing single-cell RNA-seq data across multiple conditions to infer cell trajectories and detect differential expression.
RNA seq pipeline
A Nextflow-based workflow for processing and analyzing Oxford Nanopore direct RNA sequencing data
RNA-seq analyzer
A workflow generator for single-cell RNA-seq data analysis
Cell data analyzer
Probabilistic analysis tools for single-cell omics data
Multi-omics analyzer
Analyzes single-cell multi-omics data from various modalities like RNA-seq and ATAC-seq
Cell annotator
Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes
Profiler
Software for preprocessing and analyzing large cell profiling datasets
Build workflow manager
Utility for managing builds and complex workflows in bioinformatics
scRNA-seq analyzer
An integrated Bayesian hierarchical model to analyze single-cell sequencing data
single-cell transcriptomics tutorials
Educational materials and exercises for a course on advanced topics in single-cell transcriptomics
biofam/mofa233
Multi-Omics Analyzer
A factor analysis model that integrates multi-omics data sets to identify underlying cellular states or disease subgroups.
Cell type annotation tool
A tool for accurately annotating cell types in single-cell RNA sequencing data using deep learning
Single-cell data processor
Tools for analyzing aligned single-cell data from sequencing experiments
Occupancy models
Provides tools for building occupancy models in ecology using Bayesian statistics and spatial modeling.
