wham
Genome variant detector
Software tool for detecting and analyzing structural variants in genomes
Structural variant detection and association testing
104 stars
19 watching
25 forks
Language: C++
last commit: over 2 years ago
Linked from 1 awesome list
Related projects:
| Repository | Description | Stars |
|---|---|---|
| | A workflow designed to detect germline and somatic variants from WGS and targeted sequencing data using bioinformatics tools. | 412 |
| | A Nextflow-based pipeline for detecting structural variants in whole-genome reads using the Cortex-Var algorithm. | 2 |
| | An R package that uses Bayesian inference and hidden Markov models to detect genetic variations in single-cell RNA-seq data | 98 |
| | Detects and characterizes copy-number variations in single-cell whole genome sequencing data using computational models | 17 |
| | A tool for analyzing metagenomic data by aligning short or long reads against a reference sequence and generating reports on bacterial growth and abundance | 13 |
| | Software to detect copy number variations from single-cell RNA-seq data using probabilistic modeling and machine learning algorithms | 579 |
| | Analyzes single-cell RNA-seq data to detect allele-specific copy number variations and infer lineage relationships in cancer cells | 171 |
| | Analyzing multiplexed single-cell RNA-seq data from a marine organism, providing tools for preprocessing, clustering, and analysis of gene expression across different cell types. | 2 |
| | A software framework for genomic association studies using C. elegans data | 8 |
| | Automates scanning of files with VirusTotal, a threat intelligence platform. | 166 |
| | A tool for detecting somatic variants in single-cell data | 177 |
| | A mutation analysis tool for assessing code change impact | 17 |
| | A .Net wrapper library for the native Yara library to quickly identify and classify malware samples. | 38 |
| | An ultra-sensitive multi-sample variant caller for NGS data | 50 |
| | A C++ variant type that allows storing and retrieving different types of data | 11 |