scLVM
by PMBio
scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources of variation.
AI summary
Heterogeneity analyzer
A framework for dissecting heterogeneity in single-cell RNA-seq data to correct confounding sources of variation
- stars
- 104
- forks
- 46
- watching
- 19
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Factor analyzer
Analyzes correlated hidden factors from single-cell transcriptomes to identify biological variation
Cell analysis tool
Provides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis.
Cell data analyzer
Probabilistic analysis tools for single-cell omics data
Microscopy analyzer
A Python framework for analyzing and annotating microscopy data
scRNA-seq analyzer
An integrated Bayesian hierarchical model to analyze single-cell sequencing data
Genetic variation detector
An R package that uses Bayesian inference and hidden Markov models to detect genetic variations in single-cell RNA-seq data
State analyzer
Analyzes multi-sample scRNA-seq data to identify differential states between cell subpopulations and experimental conditions.
Microscopy analyzer
An analysis platform for super-resolution microscopy data
Seq analysis pipeline
A high-level configuration file drives parallel variant calling and analysis on sequencing data.
Differentiation analyzer
A probabilistic model to analyze single-cell expression data during differentiation
Variation detector
An interactive R application to detect and annotate hidden sources of variation in single cell RNA-seq data
Cell analysis software
Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis.
Metagenomics analyzer
A tool for analyzing metagenomic data by aligning short or long reads against a reference sequence and generating reports on bacterial growth and abundance
mcs07/molvs163
Structure validator
Tool for validating and standardizing chemical structures to improve data quality and facilitate comparisons.
Multi-omics analyzer
Analyzes single-cell multi-omics data from various modalities like RNA-seq and ATAC-seq
Featured in 1 awesome list
Each link jumps to the spot where the list mentions scLVM.
