scell
Cell analysis software
Software tool for analyzing single-cell RNA-seq data from brain tumor samples.
Single-CELL rna-seq analysis software
38 stars
6 watching
11 forks
Language: Matlab
last commit: about 8 years ago Related projects:
| Repository | Description | Stars |
|---|---|---|
 kharchenkolab/numbat | Analyzes single-cell RNA-seq data to detect allele-specific copy number variations and infer lineage relationships in cancer cells | 171 |
 hms-dbmi/scde | Provides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis. | 173 |
 nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
 nbisweden/workshop-scrnaseq | An educational resource offering interactive R, Python, and Seurat labs for analyzing single-cell RNA sequencing data. | 199 |
 zjufanlab/sccatch | Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes | 219 |
 rabadanlab/sctda | An object-oriented Python library for analyzing single-cell RNA-seq data using topological representations | 7 |
 drisso/bioc2016singlecell | Analyzing single-cell RNA-seq data using R and Bioconductor tools | 76 |
 imb-computational-genomics-lab/ascend | Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis. | 22 |
 compbel/scifil | A computational tool for analyzing single cell sequencing data to infer fitness landscapes of cancer cell populations. | 5 |
| zjufanlab/scdeepsort | A tool for accurately annotating cell types in single-cell RNA sequencing data using deep learning | 100 |
 catavallejos/basics | An integrated Bayesian hierarchical model to analyze single-cell sequencing data | 84 |
 xmc811/scillus | A package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets. | 60 |
 lingfeiwang/normalisr | A software framework for analyzing single-cell RNA sequencing data | 18 |
 scverse/scvi-tools | Probabilistic analysis tools for single-cell omics data | 1,270 |
 cellgeni/scrna.seq.course | An educational resource teaching computational analysis of single-cell RNA-seq data using R and Bioconductor tools | 125 |