scell
Cell analysis software
Software tool for analyzing single-cell RNA-seq data from brain tumor samples.
Single-CELL rna-seq analysis software
38 stars
6 watching
11 forks
Language: Matlab
last commit: about 7 years ago Related projects:
Repository | Description | Stars |
---|---|---|
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hms-dbmi/scde | Provides statistical methods for analyzing single-cell RNA-seq data, focusing on error modeling and differential expression analysis. | 173 |
nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
nbisweden/workshop-scrnaseq | An educational resource offering interactive R, Python, and Seurat labs for analyzing single-cell RNA sequencing data. | 195 |
zjufanlab/sccatch | Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes | 218 |
rabadanlab/sctda | An object-oriented Python library for analyzing single-cell RNA-seq data using topological representations | 7 |
drisso/bioc2016singlecell | Analyzing single-cell RNA-seq data using R and Bioconductor tools | 77 |
imb-computational-genomics-lab/ascend | Tools and methods for analyzing single-cell RNA sequencing data, including expression normalization and differential gene expression analysis. | 22 |
compbel/scifil | A computational tool for analyzing single cell sequencing data to infer fitness landscapes of cancer cell populations. | 5 |
zjufanlab/scdeepsort | A tool for accurately annotating cell types in single-cell RNA sequencing data using deep learning | 99 |
catavallejos/basics | An integrated Bayesian hierarchical model to analyze single-cell sequencing data | 84 |
xmc811/scillus | A package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets. | 53 |
lingfeiwang/normalisr | A software framework for analyzing single-cell RNA sequencing data | 18 |
scverse/scvi-tools | Probabilistic analysis tools for single-cell omics data | 1,251 |
cellgeni/scrna.seq.course | An educational resource teaching computational analysis of single-cell RNA-seq data using R and Bioconductor tools | 123 |