DESMAN
Strain analyzer
Software for analyzing genetic data from environmental samples to infer the presence of specific strains
De novo Extraction of Strains from MetAgeNomes
69 stars
9 watching
22 forks
Language: Python
last commit: over 5 years ago
Linked from 1 awesome list
Related projects:
| Repository | Description | Stars |
|---|---|---|
| | A tool for analyzing metagenomic data by aligning short or long reads against a reference sequence and generating reports on bacterial growth and abundance | 13 |
| | Bioinformatics software suite for analyzing DNA sequences and pipelines. | 218 |
| | Tools to extract configuration data from known malware samples in memory images. | 483 |
| | A software tool that identifies sample identity and detects multiplets in pooled single cell RNA-seq samples. | 122 |
| | Analyzing multiplexed single-cell RNA-seq data from a marine organism, providing tools for preprocessing, clustering, and analysis of gene expression across different cell types. | 2 |
| | A command-line tool for analyzing single-cell DNA methylation data | 11 |
| | Tool to analyze and modify Android bytecode for security research and analysis | 52 |
| | Automates reconnaissance and service enumeration of network hosts to gather information and write recommendations for further testing. | 2,124 |
| | A high-level configuration file drives parallel variant calling and analysis on sequencing data. | 995 |
| | A bioinformatic pipeline for analyzing genetic variants in genomic data | 5 |
| | A toolkit for analyzing single-cell epigenomics data from open chromatin and DNA methylation experiments. | 141 |
| | An R package for analyzing tree-ring data to identify insect defoliators and disturbances in forests | 7 |
| | An SIEM system that uses machine learning and CVSS measurements to detect security threats. | 3 |
| | An interactive software tool for analyzing single-cell omics data | 32 |
| | Analyzes DNA sequencing data from circular vectors to generate annotated maps and GenBank files. | 5 |