ngless
NGS processor
A domain-specific language for processing next-generation sequencing data
NGLess: NGS with less work
142 stars
11 watching
24 forks
Language: Haskell
last commit: 3 months ago bioinformaticsbioinformatics-pipelinebwafastqfastq-formatgenomicshaskellhaskell-languagemetagenomicsnext-generation-sequencingngssamtoolsscience
Related projects:
Repository | Description | Stars |
---|---|---|
iarcbioinfo/iarc-nf | Provides a collection of pre-configured bioinformatics pipelines and tools for analyzing next-generation sequencing data. | 47 |
justfollowus/natural-language-processing | Comprehensive resource for learning natural language processing (NLP) with a structured course outline and recommended readings. | 834 |
serifandsemaphore/go-serverless-list | A curated list of resources and tools for deploying and managing Go code on serverless platforms | 123 |
ndmitchell/cmdargs | A Haskell library for building command line applications with minimal code | 91 |
neohaskell/neohaskell | A Haskell-based tooling framework designed to enhance developer productivity and newcomer-friendliness. | 276 |
tweag/haskellr | An environment for efficient data processing using Haskell or R code. | 585 |
andremrsantos/next-pipes-lghm | A collection of Nextflow pipelines for analyzing NGS data from the LGHM bioinformatics lab | 3 |
nathanmarz/cascalog | A library for data processing and querying on large datasets without the need for Hadoop expertise | 1,376 |
google-research/dex-lang | A research language for array processing, exploring type systems and program transformations. | 1,590 |
holtgrewe/ngs_pipelines | A suite of Nextflow-based pipelines for typical NGS processing tasks | 6 |
mit-han-lab/proxylessnas | Direct neural architecture search on target task and hardware for efficient model deployment | 1,425 |
guigolab/chip-nf | Automated pipeline for processing ChIP-seq data | 17 |
charite/ngspipeline | A Nextflow-based workflow management system for processing next-generation sequencing data. | 7 |
zhaskell/stdio | A Haskell toolkit providing standardized input/output functions powered by libuv | 104 |
haskell/parsec | A parser combinator library designed to be industrial-strength and easy to use | 847 |