OpenMicroscopy
Microscopy hub
A collection of resources and projects facilitating collaboration and sharing in the field of microscopy
Non-comprehensive list of projects and resources related to open microscopy.
135 stars
16 watching
28 forks
last commit: 6 months ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
| Develops software and data format standards for the storage and manipulation of biological microscopy data. | 202 |
| An open-source project providing instructions and resources for building a simple microscope using Lego parts. | 1,001 |
| A toolkit for using deep learning in microscopy without requiring extensive coding expertise | 568 |
| Automating microscopy workflows using Python and Open Application Development tools | 129 |
| A PyTorch-based package for analyzing microscopy data with machine learning algorithms | 197 |
| A Python framework for analyzing and annotating microscopy data | 138 |
| A curated collection of resources and lists on various topics, including science, coding, neuroscience, and industry. | 5 |
| An application suite for light microscopy acquisition, data storage, visualization, and analysis | 85 |
| A repository providing guides and advice on best practices for working openly in scientific research | 4 |
| A project comparing and tracking features of various photo libraries to help developers find alternatives for their applications. | 2,013 |
| A software package for reading microscopy images and metadata from NIS Elements files | 45 |
| An end-to-end microscopy processing pipeline that extracts features from multiplexed whole slide imaging and tissue microarrays using containerized steps. | 115 |
| Provides Python tools for reading, writing and managing microscopy images | 207 |
| Centralized hub for Open Containers Initiative information and project governance | 47 |
| A package for analyzing and visualizing microscopy data, integrating segmentation tools with Rstats and ggplot2. | 4 |