nd2reader

Microscopy reader

A software package for reading microscopy images and metadata from NIS Elements files

Pure Python library for reading NIS Elements ND2 images and metadata

GitHub

45 stars
5 watching
29 forks
Language: Python
last commit: over 2 years ago
Linked from 1 awesome list

microscopymicroscopy-imagesnd2nikonnis-elementspims

Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
python-microscopy/python-microscopyAn application suite for light microscopy acquisition, data storage, visualization, and analysis85
allencellmodeling/aicsimageioProvides Python tools for reading, writing and managing microscopy images207
ome/openmicroscopyDevelops software and data format standards for the storage and manipulation of biological microscopy data.202
zeiss-microscopy/oadAutomating microscopy workflows using Python and Open Application Development tools129
bmirds/deepslideClassifies high-resolution microscopy images of lung adenocarcinoma using deep neural networks with a sliding window framework.494
pycroscopy/atomaiA PyTorch-based package for analyzing microscopy data with machine learning algorithms197
austinmurphy/obd2-scantoolA Python-based tool for reading OBD2 data from cars215
schmollerlab/cell_acdcA Python framework for analyzing and annotating microscopy data138
stevedoyle2/pynastranAn interface library to Nastran file formats, allowing users to read and manipulate model geometry and results data.395
nipy/nibabelA package that provides access to various neuro-imaging file formats through a unified interface.660
allencellmodeling/napari-aicsimageioA plugin for the napari viewer that allows reading of multiple image file formats into the application using pure Python34
redoxcode/micropython-ppm_readerA Python library to decode PPM signals from RC receivers11
hohlbeinlab/openmicroscopyA collection of resources and projects facilitating collaboration and sharing in the field of microscopy135
nire0510/d2Provides quick access to online documentation of popular development tools and libraries11
flika-org/flikaAn interactive image processing tool for analyzing biological microscopy images22