nd2reader

Microscopy reader

A software package for reading microscopy images and metadata from NIS Elements files

Pure Python library for reading NIS Elements ND2 images and metadata

GitHub

45 stars
5 watching
29 forks
Language: Python
last commit: 9 months ago
Linked from 1 awesome list

microscopymicroscopy-imagesnd2nikonnis-elementspims

Backlinks from these awesome lists:

Related projects:

Repository Description Stars
python-microscopy/python-microscopy A software suite for light microscopy image acquisition, analysis, and visualization 84
allencellmodeling/aicsimageio Provides Python tools for reading, writing and managing microscopy images 205
ome/openmicroscopy Develops software and data format standards for the storage and manipulation of biological microscopy data. 200
zeiss-microscopy/oad Automates microscopy workflows using Python and AI tools to simplify and customize image acquisition, analysis, and processing. 127
bmirds/deepslide Classifies high-resolution microscopy images of lung adenocarcinoma using deep neural networks with a sliding window framework. 489
pycroscopy/atomai A PyTorch-based package for analyzing microscopy data with machine learning algorithms 194
austinmurphy/obd2-scantool A Python-based tool for reading OBD2 data from cars 213
schmollerlab/cell_acdc A Python framework for analyzing and annotating microscopy data 133
stevedoyle2/pynastran An interface library to Nastran file formats, allowing users to read and manipulate model geometry and results data. 396
nipy/nibabel A package that provides access to various neuro-imaging file formats through a unified interface. 654
allencellmodeling/napari-aicsimageio A plugin for the napari viewer that allows reading of multiple image file formats into the application using pure Python 33
redoxcode/micropython-ppm_reader A Python library to decode PPM signals from RC receivers 11
hohlbeinlab/openmicroscopy A collection of resources and projects facilitating collaboration and sharing in the field of microscopy 131
nire0510/d2 Provides quick access to online documentation of popular development tools and libraries 11
flika-org/flika An interactive image processing tool for analyzing biological microscopy images 22