SCIPhI
by cbg-ethz
AI summary
Phylogenetic mutation caller
An open-source software tool for mutation identification in single-cell tumor cells by inferring phylogenetic relationships among cells.
- stars
- 25
- forks
- 11
- watching
- 6
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Single-cell analyzer
A software tool for analyzing single-cell DNA sequencing data to reconstruct copy number events and cell histories in cancer research.
Mutation caller
An open source software framework for calling mutations from genomic data using a Bayesian haplotype-based approach.
Cancer gene prioritizer
Tools for integrating multi-omics data to prioritize cancer genes
Mutation detector
A tool for detecting somatic variants in single-cell data
Cancer mutation analyzer
An annotation and machine learning framework for analyzing cancer mutations
Clone assignment tool
A software package that uses Bayesian inference to assign gene expression estimates from single-cell RNA-seq and DNA-seq data to specific cancer clones.
Mutation tester
A mutation testing tool for C++ projects to detect programming errors
Variant caller
A Nextflow pipeline for RNA sequencing variant calling with GATK best practices
Clonal analyzer
Tools for visualizing and analyzing clonal expansion in immune cell populations
clonal analyzer
An R package for identifying clonal structures from single-cell RNA sequencing data using Bayesian methods.
Cancer inference tool
A software tool for inferring cancer progression from single-cell data using simulated annealing
Strain analyzer
Software for analyzing genetic data from environmental samples to infer the presence of specific strains
Mutation analysis tool
A mutation analysis tool for assessing code change impact
Mutation generator
An automated tool to help improve testbench coverage by generating and filtering mutations in digital design post-synthesis netlists
Variant annotator
A tool that identifies and annotates genetic variants in single-cell RNA sequencing data by matching mutant and reference barcodes.
Featured in 1 awesome list
Each link jumps to the spot where the list mentions SCIPhI.
