octopus
by luntergroup
Bayesian haplotype-based mutation calling
AI summary
Mutation caller
An open source software framework for calling mutations from genomic data using a Bayesian haplotype-based approach.
- stars
- 305
- forks
- 37
- watching
- 19
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Phylogenetic mutation caller
An open-source software tool for mutation identification in single-cell tumor cells by inferring phylogenetic relationships among cells.
Mutation tester
A mutation testing tool for C++ projects to detect programming errors
Mutation detector
A tool for detecting somatic variants in single-cell data
Variant caller
A Nextflow pipeline for RNA sequencing variant calling with GATK best practices
Cancer mutation analyzer
An annotation and machine learning framework for analyzing cancer mutations
Mutator
Automated unit test generation and mutation testing tool using Large Language Models.
boxed/mutmut937
Code mutator
A mutation testing system for Python that helps identify weaknesses in software code by introducing small changes and running tests to see which ones fail.
Mutation tester
A tool for mutation testing in Smalltalk to improve test quality and fault-finding effectiveness.
Code simplifier
Automated code review tool with mutation testing to simplify and improve code quality
Mutation tester
Tools for adding manual mutation tests to GitHub pull requests
Mutation Testing
An introduction to using mutation testing to validate unit tests in software development
Mutation testing framework
A framework for detecting bugs in Rust code by intentionally introducing changes and seeing if tests can catch them
Variant caller
An ultra-sensitive multi-sample variant caller for NGS data
Genetic variation detector
An R package that uses Bayesian inference and hidden Markov models to detect genetic variations in single-cell RNA-seq data
hcoles/pitest1.7K
Mutation tester
An automated testing tool designed to detect faults in software code by introducing random errors and observing the impact on test results
Featured in 1 awesome list
Each link jumps to the spot where the list mentions octopus.
