ciatah
Calcium analyzer
Software package for analyzing one- and two-photon calcium imaging datasets
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
83 stars
8 watching
21 forks
Language: MATLAB
last commit: 8 days ago
Linked from 1 awesome list
animal-trackingcalcium-imagingmatlabminiscope-imagingmotion-correctionsignal-extraction
Related projects:
Repository | Description | Stars |
---|---|---|
flatironinstitute/caiman-matlab | A tool for analyzing large-scale calcium imaging data using advanced signal processing and machine learning techniques. | 252 |
flatironinstitute/caiman | A Python toolbox for large-scale Calcium Imaging Analysis | 638 |
jinghaolu/min1pipe | Automated pipeline for processing calcium imaging data from MINiscope cameras | 59 |
mouseland/suite2p | A software framework for processing two-photon calcium imaging data from neuroscience research. | 358 |
cbib/dypfish | A Python library for statistical analysis of mRNA and protein distributions in single cell confocal images | 2 |
scialdonelab/comunet | An exploratory tool for analyzing intercellular communication from single-cell transcriptional data. | 12 |
rraadd88/htsimaging | A Python package for analyzing high-throughput single-cell imaging data | 5 |
priyavrat-misra/xrays-and-gradcam | This project uses deep learning to analyze chest radiographs and diagnose COVID-19. | 49 |
adalca/neurite | A comprehensive neural networks toolbox focused on medical image analysis using TensorFlow and Keras. | 340 |
jiupinjia/neural-magic-eye | Training an image processing neural network to recover depth and content from autostereograms | 72 |
meituan-automl/lenna | An AI-powered image detection system with language-based reasoning capabilities | 78 |
cbica/captk | Software platform for analyzing medical images and predicting cancer outcomes through machine learning | 181 |
baidu-research/ncrf | Automated detection of cancer metastasis using deep learning and conditional random fields. | 756 |
colah/hasksymb | A proof-of-concept system for manipulating mathematical expressions using a custom language and pattern matching mechanism. | 72 |
byucamacholab/autogator | Software package for camera-assisted motion control and experiment configuration of photonic integrated circuit interrogation platforms. | 6 |