NCRF

Metastasis detector

Detects cancer metastasis in whole slide images using deep learning and conditional random fields

Cancer metastasis detection with neural conditional random field (NCRF)

GitHub

757 stars
37 watching
183 forks
Language: Python
last commit: almost 3 years ago
camelyon16conditional-random-fieldsdeep-learningpathologywhole-slide-imaging

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