FA-nf
Protein annotator
Automated annotation pipeline for functional protein analysis in non-model organisms
Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow
3 stars
2 watching
1 forks
Language: Perl
last commit: over 6 years ago
Linked from 1 awesome list
nextflow-io/awesome-nextflowRelated projects:
| Repository | Description | Stars |
|---|---|---|
 guigolab/fa-nf | A pipeline for annotating protein function from non-model organisms using Nextflow and various bioinformatics tools | 17 |
 evanfloden/lncrna-annotation-nf | A pipeline for annotating long non-coding RNAs from RNA sequencing data using the STAR, Cufflinks, and FEELnc tools. | 11 |
 robsyme/nextflow-annotate | A workflow repository providing tools and recipes for genome annotation using NextFlow | 20 |
| evanfloden/vast-tools-nf | A Nextflow implementation of VAST-TOOLS for profiling alternative splicing events in RNA-Seq data | 5 |
 nf-core/rnafusion | A bioinformatics pipeline for detecting and analyzing gene fusions from RNA sequencing data | 147 |
 cbcrg/ampa-nf | An automated pipeline for predicting protein antimicrobial regions | 5 |
 anikfal/postwrf | Tools and scripts for visualizing and post-processing atmospheric model data from WRF and ERA5 sources. | 56 |
| guigolab/grape-nf | Automated RNA-seq analysis pipeline using Nextflow and Docker/Singularity containers | 37 |
 connor-lab/ncov2019-artic-nf | Automates bioinformatics analysis of SARS-COV2 sequencing data using the ARTIC network's fieldbioinformatics tools. | 91 |
 nmdp-bioinformatics/flow-blast-hml | Automates sequence analysis from HML files using blast algorithms | 1 |
| robsyme/nf-repeatmasking | Automates repeat detection and masking in genomic data analysis | 13 |
 averasd/nextflow-rnastar | A Nextflow pipeline for analyzing transcriptome data using STAR and featurecounts | 4 |
 danilafe/matrix-highlight | Annotates web pages in a decentralized and federated manner using Matrix | 142 |
| cbcrg/grape-nf | A pipeline for RNA-Seq analyses using nextflow | 2 |
 stefan-jansen/alphalens-reloaded | Analyzes performance of predictive stock factors | 334 |