zinbwaveZinger
RNA-seq analyzer
A software framework for integrating zingeR with ZINB-WaVE weights for RNA-seq data analysis
Integrating zingeR with ZINB-WaVE weights
23 stars
9 watching
7 forks
Language: TeX
last commit: over 8 years agoLinked from 1 awesome list
seandavi/awesome-single-cellRelated projects:
| Repository | Description | Stars |
|---|---|---|
 lingfeiwang/normalisr | A software framework for analyzing single-cell RNA sequencing data | 18 |
 sh3llyr/statistrings | Analyze strings in files to aid malware detection and hunting by calculating their prevalence | 12 |
 yeolab/outrigger | Automates detection and quantification of alternative splicing events from RNA seq data using graph databases. | 65 |
 qifeidkn/stagate | A software framework for learning spatial embeddings from high-dimensional transcriptomics data using an adaptive graph attention auto-encoder | 41 |
 nsalomonis/altanalyze | An automated cross-platform workflow for RNA-Seq gene and splicing analysis | 100 |
 neurosurgery-brain-tumor-center-diazlab/scell | Software tool for analyzing single-cell RNA-seq data from brain tumor samples. | 38 |
 su-informatics-lab/dstg | Software implementation of graph-based AI method for decomposing spatial transcriptomics data | 35 |
 phoenixding/scdiff | Analyzes single-cell RNA-seq data to predict cell differentiation trajectories and associated transcription factors and genes. | 28 |
 vladmrnv/statify | A ZSH plugin for performing basic math and statistical operations. | 4 |
 yoseflab/scone | Tools for quality control and normalization of single-cell RNA-seq data | 53 |
 fengb/zasp | A streaming parser implemented in Zig, designed to efficiently process and analyze data streams. | 16 |
 crazyhottommy/rna-seq-analysis | A collection of resources and tools for analyzing RNA sequencing data using Python and Snakemake workflows | 951 |
 rhondabacher/scnorm | A software tool for normalizing single-cell RNA-seq data to enhance comparability and accuracy of downstream analyses | 47 |
 bimsbbioinfo/netsmooth | Improves single cell RNA-seq data by smoothing out noise using prior information from gene interaction networks | 27 |
 snakemake-workflows/single-cell-rna-seq | A workflow generator for single-cell RNA-seq data analysis | 100 |