FIELDimageR

Image analyzer

A package to analyze orthomosaic images from agricultural field trials and extract relevant information

FIELDimageR: A R package to analyze orthomosaic images from agricultural field trials. This package is a compilation of functions to analyze pos-mosaicking images from research fields, and allows to: crop the image; remove soil effect; build vegetation indices; rotate the image; build the plot shapefile; extract information for each plot; and evaluate stand count, canopy percentage, and plant height.

GitHub

239 stars
41 watching
92 forks
Language: R
last commit: 6 months ago
Linked from 1 awesome list


Backlinks from these awesome lists:

Related projects:

Repository Description Stars
reginalexavier/openland An R package for analyzing land use and cover change, providing tools for visualization and intensity analysis of time series data. 21
r-spatialecology/landscapemetrics A software package that enables reproducible landscape analysis using categorical map patterns in R. 230
ericpante/marmap A tool for analyzing and visualizing bathymetric and topographic data using R. 32
mlampros/openimager An R package providing a toolkit for image processing and recognition. 59
gregor-mendel-institute/aradeepopsis A tool for extracting phenotypic measurements from plant images using deep learning and computer vision techniques 41
chguiterman/dfoliatr An R package for analyzing tree-ring data to identify insect defoliators and disturbances in forests 7
lukasvalentin/obia4rtm An object-based image analysis tool for plant parameter retrieval from radiative transfer models using satellite data. 18
vrrenske/bactmap A package for analyzing and visualizing microscopy data, integrating segmentation tools with Rstats and ggplot2. 4
predictivephenomics/rhizovisionexplorer An image analysis software for extracting plant root features from images 14
opengeos/lidar A Python package for analyzing digital elevation models to identify and delineate surface depressions 249
agrocares/open-bodem-index-calculator A calculator tool for evaluating agricultural soil based on multiple criteria and indicators. 11
martibosch/pylandstats A Python library for analyzing landscape metrics and evolution 83
ome/openmicroscopy Develops software and data format standards for the storage and manipulation of biological microscopy data. 200
zumbov2/colorfindr An R package that extracts colors from images and visualizes their composition using interactive plots. 137
computational-plant-science/dirt Automates root trait analysis from images of monocot and dicot roots using computer vision and image processing techniques. 25