topslam
Epigenetic landscape generator
A tool for extracting probabilistic epigenetic landscapes from single cell gene expression measurements.
manifold metric and correction techniques for (Bayesian) GPLVM from GPy
12 stars
3 watching
1 forks
Language: Jupyter Notebook
last commit: almost 5 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
| A tool for generating and visualizing fractals using L-Systems | 103 |
| A library for generating realistic random data in various formats | 18 |
| Tools for integrating multi-omics data to prioritize cancer genes | 15 |
| A tool that generates pixel sprites by applying randomized masks to a template | 12 |
| A toolkit for analyzing single-cell epigenomics data from open chromatin and DNA methylation experiments. | 141 |
| Automates Zod schema generation from Prisma models. | 837 |
| An R package for identifying cell states and cis-regulatory topics from single-cell epigenomics data | 135 |
| A package for normalizing gene expression matrices using various techniques. | 9 |
| A software framework for analyzing single-cell DNA methylation data using Bayesian methods | 14 |
| Software tool for detecting and analyzing structural variants in genomes | 104 |
| Software to model transcriptional cell fates as mixtures of Gaussian Processes | 19 |
| A tool for analyzing metagenomic data by aligning short or long reads against a reference sequence and generating reports on bacterial growth and abundance | 13 |
| An open-source Python package for applying Gaussian processes to images and hyperspectral data for reconstruction and Bayesian optimization. | 57 |
| An open-source software tool for mutation identification in single-cell tumor cells by inferring phylogenetic relationships among cells. | 25 |
| A Bayesian model for clustering and enhancing spatial gene expression data | 114 |