scTOP
A package for identifying cell phenotype from single-cell RNA-sequencing data.
AI summary
Cell phenotype projector
A tool for identifying cell phenotypes from single-cell RNA sequencing data by projecting onto known cell types
- stars
- 3
- forks
- 2
- watching
- 1
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Cell type annotation tool
A tool for accurately annotating cell types in single-cell RNA sequencing data using deep learning
Cell classifier
Classifies cellular phenotype in single-cell RNA sequencing data using neural networks
Cell classifier
Automated tool for classifying cells in scRNA data and inferring copy number profiles of malignant cells.
Cell data analyzer
Probabilistic analysis tools for single-cell omics data
Cell annotator
Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes
Clonal analyzer
Tools for visualizing and analyzing clonal expansion in immune cell populations
Differentiation analyzer
A probabilistic model to analyze single-cell expression data during differentiation
Cell analysis tool
A Python-based software framework for analyzing mass/flow cytometry data to identify phenotype-associated cell subsets.
clonal analyzer
An R package for identifying clonal structures from single-cell RNA sequencing data using Bayesian methods.
Cell assigner
Automated assignment of cell types in single-cell RNA-seq data based on marker genes and patient/batch effects
cell network inference tool
An R package that infers cell-cell communication and ligand-receptor-target networks from spatially resolved transcriptomic data
Trajectory analysis
Analyzing and comparing single-cell RNA-seq data across multiple conditions to infer cell trajectories and detect differential expression.
Transcriptomics analysis tool
Software package for cell type identification and differential expression in spatial transcriptomics
Cell shape analyzer
Analyzes 3D cell shape features using deep learning for cancer research
Data analyzer
Analyzes single cell RNA sequence data with quantitative phenotypes
Featured in 1 awesome list
Each link jumps to the spot where the list mentions scTOP.
