trendsceek
Gene trend analyzer
Identifies genes with spatial expression trends in single-cell gene-expression data
Identify genes with spatial expression trends in single-cell gene expression data
50 stars
7 watching
17 forks
Language: HTML
last commit: almost 7 years ago
Linked from 1 awesome list
Related projects:
Repository | Description | Stars |
---|---|---|
| Tools and methods to analyze gene expression data in relation to spatial coordinates | 151 |
| A toolset for analyzing single-cell gene expression data from RNA sequencing experiments. | 24 |
| An R package providing tools for analyzing single-cell RNA-seq data and identifying gene expression patterns. | 4 |
| A software package for analyzing and visualizing spatial gene expression data from single-cell RNA sequencing assays. | 13 |
| An R package to identify genes with differential distributions in single-cell RNA-seq experiments | 32 |
| A software framework for learning spatial embeddings from high-dimensional transcriptomics data using an adaptive graph attention auto-encoder | 41 |
| Software package for cell type identification and differential expression in spatial transcriptomics | 322 |
| Analyzing and comparing single-cell RNA-seq data across multiple conditions to infer cell trajectories and detect differential expression. | 25 |
| A software package that analyzes single-cell RNA-seq data to identify differential gene expression with capture efficiency adjustments | 14 |
| A package for analyzing single-cell RNA-seq data using a beta-Poisson model. | 16 |
| Analytical framework for single-cell data analysis | 1 |
| A Bayesian model for clustering and enhancing spatial gene expression data | 114 |
| A collection of example notebooks demonstrating GPU-accelerated single-cell genomic analysis using the RAPIDS libraries | 327 |
| A software package for performing gene set enrichment analysis in various types of biological data. | 580 |
| Analyze single cell mRNA expression at specific genomic loci using read alignment and filtering techniques | 0 |