spatialGE
by FridleyLab
Methods for visualization and analysis of spatially-resolved gene expression
AI summary
Gene Expression Analyzer
A software package for analyzing and visualizing spatial gene expression data from single-cell RNA sequencing assays.
- stars
- 13
- forks
- 6
- watching
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Gene expression analysis tool
Tools and methods to analyze gene expression data in relation to spatial coordinates
Gene expression analyzer
A toolset for analyzing single-cell gene expression data from RNA sequencing experiments.
Gene expression analyzer
An R package providing tools for analyzing single-cell RNA-seq data and identifying gene expression patterns.
Gene expression analyzer
A Python package that performs sparse linear model fitting on gene expression data and SNV matrices.
Spatial Transcriptomics Analyzer
A software framework for learning spatial embeddings from high-dimensional transcriptomics data using an adaptive graph attention auto-encoder
Biodiversity analysis library
This package provides functions to fit and apply Generalized Dissimilarity Modeling to analyze spatial patterns of biodiversity.
Gene analysis tool
A software package for performing gene set enrichment analysis in various types of biological data.
Gene expression analyzer
A Python toolkit for analyzing large-scale single-cell gene expression data
Gene expression analyzer
A tool for analyzing Single-cell RNA-Seq data to identify patterns and clusters in gene expression.
Gene mapping tool
A Python package for aligning single-cell transcriptomic data with spatial gene expression data.
Gene trend analyzer
Identifies genes with spatial expression trends in single-cell gene-expression data
Gene expression analyzer
A software package that analyzes single-cell RNA-seq data to identify differential gene expression with capture efficiency adjustments
Gene regulator finder
A computational framework that integrates single-cell chromatin accessibility and gene expression data to infer transcriptional regulators of target genes.
Transcriptomics analysis tool
Software package for cell type identification and differential expression in spatial transcriptomics
Gene viewer
An R-based application for exploring and visualizing gene expression data