NEMO

Multi-omics clustering

An implementation of a multi-omics clustering algorithm that integrates data from different omics types into a cohesive clustering framework

GitHub

15 stars
6 watching
3 forks
Language: R
last commit: over 6 years ago
Linked from 1 awesome list


Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
hemberg-lab/sc3A tool for clustering cells from single cell RNA-Seq experiments121
jhu99/scbeanAnalyzes single-cell multi-omics data from various modalities like RNA-seq and ATAC-seq16
biofam/mofaA factor analysis model that integrates multi-omics data sets to identify underlying cellular states or disease subgroups.233
navdeep-g/h2o3-pamAn implementation of the PAM algorithm in H2O-3 for clustering data.1
scverse/muonA Python framework for multimodal omics analysis of high-throughput biological data222
mbrbic/multi-view-lrsscAn algorithm implementation for multi-view low-rank sparse subspace clustering using PCA on heterogeneous data views55
alexgkendall/optics_clusteringA MATLAB implementation of an unsupervised clustering algorithm that groups data points based on their density and reachability distances58
thupchnsky/mufcAn implementation of a federated clustering approach with an unlearning mechanism to improve data privacy and security in distributed machine learning19
youweiliang/multi-view_clusteringProvides implementations of various multi-view spectral clustering algorithms for data analysis and visualization.87
kchen-lab/bindscA tool for integrating multi-omics data from single cell sequencing technologies to improve analysis accuracy and discovery of biological patterns.34
subho406/omninetAn implementation of a unified architecture for multi-modal multi-task learning using PyTorch.515
xuyxu/clusteringThis repository provides implementations of various clustering and subspace clustering algorithms in MATLAB, including K-means, ISODATA, Mean Shift, DBSCAN, Gaussian Mixture Model, LVQ, Subspace Clustering Algorithms like Subspace K-means and Entropy-Weighting Subspace K-means.227
zuberlab/mageck-nfAnalyzes multiplexed CRISPR/shRNA Screens using statistical methods3
shahsohil/dccAn implementation of Deep Continuous Clustering algorithms using PyTorch.209
galadrielbriere/clustomicsAn open-source software tool for applying consensus clustering to multi-omic data for disease subtyping5