millefy
Coverage visualization tool
Visualizes read coverage of single-cell RNA-seq datasets in genomic contexts to highlight cell-to-cell heterogeneity
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
27 stars
3 watching
2 forks
Language: R
last commit: almost 5 years ago
Linked from 1 awesome list
genome-browservisualization
seandavi/awesome-single-cellRelated projects:
| Repository | Description | Stars |
|---|---|---|
 yulab-smu/ggsc | A package for visualizing single cell and spatial transcriptomics data using R | 43 |
 yoseflab/fastproject | Provides tools and methods for visualizing and analyzing single cell RNA-seq data in low dimensions | 35 |
 dtm2451/dittoseq | A suite of functions for analyzing and visualizing RNA sequencing data | 190 |
 zjufanlab/sccatch | Automated tool for annotating cell types from single-cell RNA sequencing data based on marker genes | 218 |
 yunshun/singlecellworkshop | An educational workshop on single-cell RNA-seq analysis using the Seurat R package | 0 |
 kharchenkolab/numbat | Analyzes single-cell RNA-seq data to detect allele-specific copy number variations and infer lineage relationships in cancer cells | 166 |
 zuberlab/mageck-nf | Analyzes multiplexed CRISPR/shRNA Screens using statistical methods | 3 |
 qinzhu/pivot | An interactive analysis and visualization platform for RNA-Seq data | 0 |
| yulab-smu/ggfun | A collection of reusable R functions for data visualization and analysis | 18 |
 shanky-21/data_visualization | Provides a platform for data visualization using Jupyter Notebook | 41 |
 xmc811/scillus | A package for processing and visualizing single-cell RNA-seq data in R, providing an efficient and customizable framework for analyzing complex biological datasets. | 53 |
| yulab-smu/ggtree | A tool for visualizing and annotating phylogenetic trees with associated data | 840 |
 nasqar/seuratv3wizard | An R-based web application for guided single-cell RNA-seq data analysis and clustering | 33 |
 mohanbolisetty/cellview | An R-based application to visualize and explore single cell transcriptomic data | 19 |
 lilab-bcb/cirrocumulus | An interactive visualization tool for large-scale single-cell genomics data | 75 |