nextflow-demos

Workflows

A collection of sample Nextflow pipelines and programming techniques for use in workflows

Example Nextflow pipelines and programming techniques

GitHub

101 stars
8 watching
26 forks
Language: Nextflow
last commit: 3 months ago
Linked from 1 awesome list

nextflow

Backlinks from these awesome lists:

Related projects:

Repository Description Stars
peterk87/sublime-nextflow Provides syntax highlighting and snippets for Nextflow workflows in Sublime Text 4 to improve development efficiency. 24
edmundmiller/duckdb-nf An implementation of DuckDB in Nextflow, providing a workflow-based interface for data analysis and processing. 2
nextflow-io/elixir-workshop-21 A tutorial project demonstrating Nextflow workflow management for Elixir workflows 5
shuffle/workflows Automation workflows for managing and resolving incidents in a system using the Shuffle framework. 20
nextflow-io/patterns A curated collection of reusable patterns and techniques for implementing Nextflow workflows 334
nextflow-io/vscode-language-nextflow Language support for Nextflow scripts and config files in Visual Studio Code 32
nextflow-io/nf-hack17-tutorial A tutorial project providing hands-on experience with Nextflow and bioinformatics pipelines 32
umcugenetics/nextflowmodules A collection of reusable workflow modules for Nextflow 26
dowell-lab/chip-flow A Nextflow pipeline implementation of the Dowell Lab ChIP-seq analysis workflow 4
shaze/nextflow-course Teaches Nextflow DSL2 using a tutorial-style course with exercises 6
goyek/demo Demonstrates reusable build framework customization and integration with multiple tools 1
openstack/mistral Provides a mechanism to define and execute tasks in a distributed environment using a simple YAML-based language. 288
alpha-unito/streamflow A container-native workflow management system for managing multi-container environments and hybrid workflows. 52
languagemachines/luiginlp A workflow management system for Natural Language Processing tasks 21
symfony/workflow Tools for designing and managing the flow of a system 595