solo
Doublet detector
An algorithm to identify and separate doublet cells from single cell RNA-seq data in a machine learning framework.
software to detect doublets
85 stars
8 watching
13 forks
Language: Python
last commit: 4 months ago
Linked from 1 awesome list
seandavi/awesome-single-cellRelated projects:
| Repository | Description | Stars |
|---|---|---|
 jonathanshor/doubletdetection | A tool for detecting technical errors in single-cell RNA-seq data | 86 |
 chris-mcginnis-ucsf/doubletfinder | Detects doublets in single-cell RNA sequencing data by analyzing cell distances and proportions of artificial neighbors | 415 |
 swolock/scrublet | A tool to identify technical doublets in single-cell RNA-seq data by removing co-encapsulated cells from the analysis | 138 |
 ucarlab/amulet | A method for detecting doublets in single-cell ATAC-seq data | 29 |
 jw156605/singlesplice | An algorithm for detecting alternative splicing in single cells from RNA sequencing data. | 21 |
 clcarwin/sfd_pytorch | An implementation of a face detection algorithm using PyTorch | 230 |
 iosonofabio/singlet | Analyzes single cell RNA sequence data with quantitative phenotypes | 13 |
 cahanlab/singlecellnet | A package for classifying single-cell RNA-Seq data across species and platforms | 131 |
 cortes-ciriano-lab/scomatic | A tool for detecting somatic variants in single-cell data | 170 |
 psecio/canary | A security tool that enables input detection and response. | 30 |
 dolotovevgeniy/deeppyramid | A repository providing pre-trained models and training scripts for face detection using a deep neural network architecture | 23 |
 cslu-nlp/detectormorse | A tool for automatically detecting sentence boundaries in natural language text using machine learning and handcrafted features. | 90 |
 cvg/sold2 | A deep learning framework for detecting and describing lines in images, particularly robust to occlusion | 546 |
 xueliancheng/slt-net | A video object detection framework that uses temporal consistency to detect camouflaged objects in videos | 61 |
 team3997/chickenvision | An image processing system for detecting and tracking objects in camera feed using HSV color thresholding. | 31 |