rivuletpy
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
AI summary
Neuron tracer
Automates 3D neuron tracing and tree structure extraction from medical images using the Rivulet2 algorithm
- stars
- 66
- forks
- 16
- watching
- 7
- awesome list
- 1
Similar projects
Found by comparing what the projects do, not just their names.
Neuronal tracer
A software framework for semi-automated tracing and analysis of neuronal morphology in high-dimensional microscopy data
NeuroImage Viewer
An R package for visualizing and analyzing 3D biological image data
Real-time ray tracer
An implementation of Peter Shirley's Ray Tracing In One Weekend book using Vulkan and NVIDIA's RTX extension.
Brain Segmentation Pipeline
A 3D brain segmentation pipeline using Python and the Catalyst framework.
nilearn/nilearn1.2K
Brain analysis library
A comprehensive toolkit for analyzing brain imaging data using machine learning and statistical techniques.
Neuro visualization library
A Python package to visualize neuroanatomical data in 3D
Image segmentation
An ultrasound image segmentation project using Keras and U-net architecture
Image Segmentation Model
A convolutional neural network architecture for biomedical image segmentation
Neuron viewer
A platform for large-scale scientific visualization of neurons using ray-tracing and interactive rendering.
Axon extractor
A software package for extracting axonal data from brain images
Connectomics toolkit
A deep learning framework for automatic and semi-automatic segmentation of 3D image stacks in connectomics
Neuroanalysis tool
A Python library for neurophysiological data analysis and signal processing
Medical image analysis toolkit
A toolbox for building neural networks that analyze medical images
Path Tracer
A tutorial on writing a fast and photorealistic path tracer using Vulkan API
Medical Imaging DL Framework
A framework for building deep learning models on medical imaging data
Featured in 1 awesome list
Each link jumps to the spot where the list mentions rivuletpy.
