brainrender
Neuro visualization tool
A Python-based software for visualizing neuroanatomical and morphological data in 3D.
a python based software for visualization of neuroanatomical and morphological data.
547 stars
17 watching
78 forks
Language: Python
last commit: 9 days ago
Linked from 1 awesome list
anatomyneurosciencepythonvisualization
hallvaaw/awesome-biological-image-analysisRelated projects:
| Repository | Description | Stars |
|---|---|---|
| brainglobe/brainreg | Automated 3D brain registration software for aligning template brains to sample images. | 123 |
| brainglobe/brainglobe-atlasapi | A Python module providing access to brain atlas data from multiple sources. | 127 |
| brainglobe/cellfinder | Automated 3D cell detection tool for large images in microscopy and neuroscience research | 181 |
 natverse/nat | An R package for visualizing and analyzing 3D biological image data | 64 |
 bluebrain/morphio | A C++ library for reading and writing neuronal morphology data in various file formats. | 27 |
| bluebrain/brayns | A platform for large-scale scientific visualization of neurons using ray-tracing and interactive rendering. | 291 |
 nilearn/nilearn | A comprehensive framework for machine learning and statistical analysis of neuroimaging data in Python. | 1,188 |
 knossos-project/knossos | A software tool for visualizing and annotating 3D image data to reconstruct neural morphology and connectivity. | 74 |
 nengo/nengo | A Python library for building and simulating large-scale neural models | 829 |
 catalyst-team/neuro | A 3D brain segmentation pipeline using Python and the Catalyst framework. | 19 |
 google/neuroglancer | A web-based viewer for volumetric data visualization. | 1,090 |
 yanwu2014/swne | A method and library for visualizing high-dimensional biological datasets using dimensionality reduction techniques. | 104 |
 rraadd88/parag | A Python package for interactive visualization of higher-order graphs in various fields. | 2 |
 yulab-smu/ggtree | A tool for visualizing and annotating phylogenetic trees with associated data | 840 |
 rowanz/neural-motifs | A software framework for scene graph parsing with global context using PyTorch and Visual Genome data. | 525 |