Awesome Lists

awesome-open-science

by silky

awesome listHaskellpushed almost 9 years ago

some links to projects/tools related to "open science".

AI summary

Open Science Tools

A curated list of tools and projects related to open science, including computation environments, peer-review, document writing, discovery, data management, reproducibility, project management, and training resources.

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What's in the list

28 links in 11 sections, with live GitHub stats.activeno commit in 2y

computation environments

  • IPython Notebook

    (evolving into ): A browser-based notebook with support for code, rich text, mathematical expressions, inline plots and other rich media

  • Maxima

    : A computer algebra system developed in Lisp for (symbolic) mathematical computations

  • Sage Math Cloud

    : Provides Sage, Python, and other environments for computing on the cloud; also provides terminal access and git commands for cloning repositories

peer-review

  • Hypothes.is

    : Steps towards annotating and peer-reviewing the Web

document writing

  • Authorea

    : Backed by Pandoc and Git for collaborative document writing

  • ShareLaTeX

    : Online collaborative LaTeX editor

  • WriteLaTeX

    : Online collaborative LaTeX editor

discovery

data management

  • Academic Torrents

    : Publish large datasets as torrents

  • Dat-Data

    : Dat is an open source project that provides a streaming interface between every file format and data storage backend

reproducibility

project management

  • GitHub

    : (Naturally.)

  • Open science framework

    : Collect together various sources (GitHub, DropBox, etc) into one spot

  • Trello

    and (open source self-hosted alternative): Keep track of to-do items in various lists of lists; keep track of figures, comments, questions, issues, etc

organisations

journals/preprint servers

  • ArXiv

    : e-Print archive

  • ECCC

    : The Electronic Colloquium on Computational Complexity - new papers in TCS

  • SciRate

    : Front for the , with voting and comments and accounts

training/meetups

community wikis

  • Complexity Zoo

    : Definitions of complexity classes in theoreticaly computer science

  • nLab

    : A wiki-lab for collaborative work on Mathematics, Physics and Philosophy — especially from the n-point of view: insofar as these subjects are usefully treated with tools and notions of category theory or higher category theory

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