pysam
Genomics parser
A lightweight Python package for reading and manipulating genomics data in the SAM/BAM format.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
790 stars
47 watching
274 forks
Language: Cython
last commit: about 1 year ago
Linked from 1 awesome list
bioinformaticshtslibngspython
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