RS-FISH

Spot detector

Software tool for detecting precise and accurate fluorescent spots in microscopy images.

Tool for precise, interactive, fast and scalable FISH spot detection

GitHub

48 stars
12 watching
14 forks
Language: Java
last commit: almost 2 years ago
Linked from 1 awesome list


Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
weigertlab/spotiflowAn accurate and efficient spot detection method for fluorescence microscopy images and volumes using deep learning techniques64
fish-quant/big-fishA toolbox for analyzing microscopy images of cells labeled with single-molecule fluorescent in situ hybridization (smFISH) tags.58
bio-rsg/phytofitAn interactive web application for visualizing satellite data and modeling phytoplankton blooms using remote sensing techniques7
permian-global-research/rsiA collection of utility functions for working with satellite imagery data in R47
leppott/biomontoolsA collection of R functions for analyzing and processing data in biomonitoring and bioassessment13
kuangliu/pytorch-retinanetThis is a PyTorch implementation of the RetinaNet object detection algorithm with Focal Loss optimization.997
kreshuklab/plant-segA tool for cell instance aware segmentation in densely packed 3D volumetric images101
pascalirz/aspeProvides tools and data visualizations for analyzing river fish populations in France from a large-scale database.14
robinrodricks/inspiritimageA collection of algorithms and tools for image processing and analysis3
ignacio-rocco/detectorchA PyTorch wrapper around Facebook AI Research's Detectron models for object detection and instance segmentation557
ropensci/rfishbaseAn R interface to the fishbase.org database113
chengyangfu/retinamaskA Python-based implementation of a single-shot object detection algorithm using Mask R-CNN architecture.339
maju116/platypusAn R package for object detection and image segmentation with pre-trained models.130
liuyuisanai/rsa-for-object-detectionProvides a software framework for implementing object detection algorithms using Recurrent Scale Approximation (RSA) and CNN-based methods238
rajiv2790/falconeyeA real-time detection software for Windows process injections291