BioMonTools
Biomonitoring analysis tools
A collection of R functions for analyzing and processing data in biomonitoring and bioassessment
Tools for biomonitoring and bioassessment; metric calculation for benthic macroinvertebrates, fish, and periphyton.
13 stars
8 watching
5 forks
Language: R
last commit: 14 days ago
Linked from 1 awesome list
benthicbioassessmentbiomonitoringfishmacorinvertebratesmetricperiphytonr-packagerbp
protontypes/open-sustainable-technologyRelated projects:
| Repository | Description | Stars |
|---|---|---|
 biomodhub/biomod2 | An R package for ensemble forecasting of species distributions and treatment of methodological uncertainties in models. | 87 |
 lancelafontaine/bioinformatics-compbio-tools | A curated list of useful bioinformatics and computational biology tools, sorted by category. | 49 |
 planktonteam/planktonr | An R package for analyzing and visualizing phytoplankton and zooplankton data from various sources. | 4 |
 chapmanb/bcbb | A collection of reusable code for biological analysis and high-throughput sequencing | 611 |
 macroecology/letsr | A package for analyzing and handling macroecological data in R. | 28 |
 philipmostert/pointedsdms | Tools for building and evaluating integrated species distribution models from disparate datasets | 24 |
 chguiterman/dfoliatr | An R package for analyzing tree-ring data to identify insect defoliators and disturbances in forests | 7 |
 joey711/shiny-phyloseq | An interactive web application for analyzing microbiome census data | 59 |
 adokter/biorad | An R package for extracting and reporting biological signals from weather radar data. | 29 |
 preibischlab/rs-fish | Software tool for detecting precise and accurate fluorescent spots in microscopy images. | 46 |
 shyentist/fish-r-man | An analytics toolset for fisheries scientists, providing data analysis and visualization capabilities. | 14 |
 jbferet/biodivmapr | Maps biodiversity from remote-sensed images using statistical methods | 47 |
 fish-quant/big-fish | A toolbox for analyzing microscopy images of cells labeled with single-molecule fluorescent in situ hybridization (smFISH) tags. | 57 |
 martaint/intercellar | An interactive R/Shiny app for analyzing cell-cell communication from single-cell transcriptomics data | 9 |
 marce10/warbler | A package that streamlines bioacoustic analysis in R by providing tools for acoustic signal structure analysis and visualization. | 53 |