BioMonTools

Biomonitoring analysis tools

A collection of R functions for analyzing and processing data in biomonitoring and bioassessment

Tools for biomonitoring and bioassessment; metric calculation for benthic macroinvertebrates, fish, and periphyton.

GitHub

13 stars
8 watching
5 forks
Language: R
last commit: almost 2 years ago
Linked from 1 awesome list

benthicbioassessmentbiomonitoringfishmacorinvertebratesmetricperiphytonr-packagerbp

Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
biomodhub/biomod2A software framework for ensemble forecasting of species distributions and model calibration in ecology.92
lancelafontaine/bioinformatics-compbio-toolsA curated list of bioinformatics and computational biology tools for researchers.50
planktonteam/planktonrAn R package for analyzing and visualizing phytoplankton and zooplankton data from various sources.4
chapmanb/bcbbA collection of reusable code for biological analysis and high-throughput sequencing612
macroecology/letsrA package for analyzing and handling macroecological data in R.28
philipmostert/pointedsdmsTools for building and evaluating integrated species distribution models from disparate datasets25
chguiterman/dfoliatrAn R package for analyzing tree-ring data to identify insect defoliators and disturbances in forests7
joey711/shiny-phyloseqAn interactive web application for analyzing microbiome census data60
adokter/bioradAn R package for extracting and reporting biological signals from weather radar data.29
preibischlab/rs-fishSoftware tool for detecting precise and accurate fluorescent spots in microscopy images.48
shyentist/fish-r-manAn analytics toolset for fisheries scientists with a user-friendly interface and data analysis capabilities.14
jbferet/biodivmaprMaps biodiversity from remote-sensed images using statistical methods49
fish-quant/big-fishA toolbox for analyzing microscopy images of cells labeled with single-molecule fluorescent in situ hybridization (smFISH) tags.58
martaint/intercellarAn interactive R/Shiny app for analyzing cell-cell communication from single-cell transcriptomics data9
marce10/warblerA package that streamlines bioacoustic analysis in R by providing tools for acoustic signal structure analysis and visualization.53